meegpype.interfaces.freesurfer.mri_binarize module

class meegpype.interfaces.freesurfer.mri_binarize.MRIBinarize(**inputs)

Bases: FSCommand

Wrapped executable: mri_binarize.

Mandatory Inputs:

• input_volume (a pathlike object or string representing an existing file) – Input volume. Maps to a command-line argument: --i %s.

• output_volume (a pathlike object or string representing a file) – Output volume. Maps to a command-line argument: --o %s.

Optional Inputs:

• args (a string) – Additional parameters to the command. Maps to a command-line argument: %s.

• environ (a dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’) – Environment variables. (Nipype default value: {})

• inv (a boolean) – Inverse. Maps to a command-line argument: --inv.

• match (an integer) – Match. Maps to a command-line argument: --match %d.

• subjects_dir (a pathlike object or string representing an existing directory) – Subjects directory.

Outputs:

output_volume (a pathlike object or string representing an existing file) – The output volume.